PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.01G103800.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family G2-like
Protein Properties Length: 323aa    MW: 36542.8 Da    PI: 7.2834
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.01G103800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like85.55.4e-27229282255
              G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          +r+ WtpeLH+rF  +++ LGG+e+AtPk+i++ m+v+gLt ++vkSHLQkYR+
  Manes.01G103800.1.p 229 NRRSWTPELHARFAVVLHLLGGPEVATPKQIRDQMQVEGLTTNQVKSHLQKYRM 282
                          799**************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512949.379225286IPR017930Myb domain
SuperFamilySSF466893.23E-15226285IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.3E-22227284IPR009057Homeodomain-like
TIGRFAMsTIGR015572.7E-22228282IPR006447Myb domain, plants
PfamPF002494.4E-9230281IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MLSQLFLFCQ EQKEMKGVQG MLHLWQKILH WSHLDNSHCT YIGAKTKCVF ADEALRCLYA  60
FGLGLKLSYV PQSLPNAIKD LSIGESNEVK LLLLNDYLLK CQEEMTFTGV FKQELPQSRS  120
LLTDAIEALK EEMRKTRIAM GLESESSPED VLATKKRGSD EQQGLDLNNP CSDQWSNTPT  180
HHHHNKEQIC GSLSIDPSPS MEVNLTVGEN QEPVSYKMKP LTQCIWKNNR RSWTPELHAR  240
FAVVLHLLGG PEVATPKQIR DQMQVEGLTT NQVKSHLQKY RMNWRSSPEG AADPQRRSKL  300
FCRNLARPPS AAADAINMEE IN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.01G103800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021616781.10.0transcription factor HHO5-like isoform X3
RefseqXP_021616789.10.0transcription factor HHO5-like isoform X3
TrEMBLA0A2C9WJL40.0A0A2C9WJL4_MANES; Uncharacterized protein
STRINGcassava4.1_027101m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF148661012
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37180.12e-26G2-like family protein