PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.01G202200.2.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bZIP
Protein Properties Length: 305aa    MW: 33595.1 Da    PI: 4.6623
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.01G202200.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.61.7e-15225284463
                          XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                           kr rr+q+NRe+ArrsR+RK+a++ eLe +v +L  e ++L  +l  ++k++++   e+
  Manes.01G202200.2.p 225 EKRVRRMQSNRESARRSRRRKQAQLSELEAEVGQLRDECTSLLTRLTDINKKCDEASVEN 284
                          69***************************************************9877665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.4E-12221278No hitNo description
SMARTSM003388.2E-17222286IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.312224276IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.05E-10226275No hitNo description
PfamPF001701.8E-13226279IPR004827Basic-leucine zipper domain
PROSITE patternPS000360229244IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MSGIFYVDDF SDLLWQPPVH ALAMSRSASE WELLEEFFAH ASASARENNS PFVVQSPTSR  60
KPLNSDDGVV EIENPEIPAP TPLPLAPLSR DRPPRPSHRA ILSQVDAEDY PAFLKSQLDL  120
TYAAAAKSRE SSVKPEGASS LPEDQIVASK NFQSGSHVSG NGDCILKAQS EADGGSLCFP  180
ALPPTQKKQD VPARQTTSQS SREDSDDDDL DGDTETNDHM DPADEKRVRR MQSNRESARR  240
SRRRKQAQLS ELEAEVGQLR DECTSLLTRL TDINKKCDEA SVENRILNAN IETLRTKVNS  300
YCIV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1238245RRSRRRKQ
2240245SRRRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.01G202200.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021607372.10.0light-inducible protein CPRF2-like
TrEMBLA0A2C9WMA60.0A0A2C9WMA6_MANES; Uncharacterized protein
STRINGcassava4.1_008866m0.0(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54620.12e-31basic leucine zipper 25