PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.01G238100.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family NAC
Protein Properties Length: 68aa    MW: 7766.57 Da    PI: 4.6294
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.01G238100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM47.27.3e-152268148
                  NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48
                         lp+G rFhP+deelv++yLk+k +g++++  + i ev+i++++P+dLp
  Manes.01G238100.1.p 22 LPVGWRFHPSDEELVDHYLKRKRRGDPIDGLD-IGEVQICDYDPKDLP 68
                         799************************99955.**************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.42E-161368IPR003441NAC domain
PROSITE profilePS5100517.4542268IPR003441NAC domain
PfamPF023652.4E-72346IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 68 aa     Download sequence    Send to blast
MNNNSYSSYS SSGSPQFVPL NLPVGWRFHP SDEELVDHYL KRKRRGDPID GLDIGEVQIC  60
DYDPKDLP
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.01G238100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021635388.11e-24NAC domain-containing protein 69-like
TrEMBLA0A2C9WR648e-43A0A2C9WR64_MANES; Uncharacterized protein (Fragment)
STRINGcassava4.1_028980m1e-43(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF114331739
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04400.16e-13NAC domain containing protein 77