PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.01G262100.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family ERF
Protein Properties Length: 287aa    MW: 32317.6 Da    PI: 8.075
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.01G262100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.11.4e-203384156
                  AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                         s++ GVr+++ +grWvAeI+d s   +r r +lg+++t+eeAa+a+++a+++l+ge
  Manes.01G262100.1.p 33 SRFVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDTPEEAARAYDEAARALRGE 84
                         6899******.7*********43...36**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.36E-323390No hitNo description
PfamPF008471.8E-153384IPR001471AP2/ERF domain
SuperFamilySSF541712.68E-203391IPR016177DNA-binding domain
SMARTSM003801.3E-363497IPR001471AP2/ERF domain
PROSITE profilePS5103220.4553491IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-283491IPR001471AP2/ERF domain
PRINTSPR003672.7E-73546IPR001471AP2/ERF domain
PRINTSPR003672.7E-75773IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    Send to blast
MELKSGQVKP NRYQQHDVSS VQQCHFADEY VDSRFVGVRQ RPSGRWVAEI KDSSQRVRLW  60
LGTYDTPEEA ARAYDEAARA LRGENARTNF TSVNNNTNSN TTQYGSSPIN GGFLSESDVR  120
HSLSFSLLKA KLSKNIQSIM ARTTESKSTK NRVSDHFTFA SIFQFRSQQY QKPVDMNKIE  180
KVVQPSIIVP RVTDDQHEPS SWETSRLSEC SNEWIRLKEQ GLDSDGSDTG EASIDDQRLT  240
DQMMGWIDRP EISGCRGDDS RSKRFKVSSS VVVPPTFSGS PFRGNN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-1433951376Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.01G262100.1.p
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021622987.10.0ethylene-responsive transcription factor RAP2-11-like
TrEMBLA0A2C9WRL20.0A0A2C9WRL2_MANES; Uncharacterized protein
STRINGcassava4.1_021075m1e-179(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF83243143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.18e-14related to AP2 11