PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.02G053900.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family NAC
Protein Properties Length: 229aa    MW: 26119.9 Da    PI: 8.0333
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.02G053900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM35.92.2e-11329457128
                  NAM  57 ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                           wyf+s+r+k        +  t++gy     +++++++ +++l+g  +tL fy+g+ p+g+k++W++heyr+
  Manes.02G053900.1.p  32 YWYFYSNRRKG-------KILTDDGYYA-LSSHRTIID-GKKLIGFVRTLDFYNGKPPRGTKSQWTIHEYRV 94 
                          67888877553.......3479999986.556799999.999****************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100519.021123IPR003441NAC domain
PfamPF023654.3E-7794IPR003441NAC domain
SuperFamilySSF1019418.5E-1529123IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MISNPIYFKN QIHSGNVKLC ADEFNCGQPN GYWYFYSNRR KGKILTDDGY YALSSHRTII  60
DGKKLIGFVR TLDFYNGKPP RGTKSQWTIH EYRVNADTIK VNEDDIIMKE KISNFVVCKL  120
VKKGIYKPES SEEENIFSGK DSLSDKNQHN QSGRESEGSN FSIKDNKQNS KGNNSLSDED  180
KYSQSNTILS QEKVEKLKYS RDDKENSEDD REKNDIIISQ ANDAAPKS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.02G053900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021596671.11e-148NAC domain-containing protein 53-like
TrEMBLA0A2C9WCN61e-166A0A2C9WCN6_MANES; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14452718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56010.18e-13NAC domain containing protein 1