PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.02G060100.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bHLH
Protein Properties Length: 311aa    MW: 34498.9 Da    PI: 4.6431
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.02G060100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.94.4e-0955881855
                         HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                         ++f+ Lr+l+P++    ++K +Ka+ L +++eYI+ Lq
  Manes.02G060100.1.p 55 EWFQILRDLIPQN----DQKRDKASFLLEVIEYIQFLQ 88
                         69**********9....9*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.4833787IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.8E-1341111IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.05E-85592No hitNo description
SuperFamilySSF474598.11E-1155109IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.9E-65588IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MVKSAKSHHD DEDEPDGYDS SSYRGELAKV DGSSSEQKLN THRSKHSETE QPPWEWFQIL  60
RDLIPQNDQK RDKASFLLEV IEYIQFLQEK LKMYEGSYQG WSQEPTKLTP WKNHNLPVEG  120
LMDQSQVLNG SAHKTTATLT NVNNSIECDL GTTAVPFNTQ VQSNMFAAVG RAGVTAQPLQ  180
ESVSDADNIA YQLHSQLWQD RPCVPGCTAP ENILSGQGEP MIESGFVSIS NAYSQGILDT  240
LTQALRSSGV DLTQTNISVQ IDVGRQENRG AGITASSSKD QEYLYCNNQE MEQTGVGIDQ  300
AHKRQRTERS *
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.02G060100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021604630.10.0transcription factor BIM2-like isoform X1
RefseqXP_021604631.10.0transcription factor BIM2-like isoform X1
TrEMBLA0A2C9WBA50.0A0A2C9WBA5_MANES; Uncharacterized protein
STRINGcassava4.1_014086m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17303382
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.17e-49BES1-interacting Myc-like protein 2