PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Manes.02G068800.1.p

Organism

Manihot esculenta

Taxonomic ID

3983

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot

Family

bHLH

Protein Properties

Length: 276aa MW: 30946.6 Da PI: 7.9397

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Manes.02G068800.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30	9.1e-10	168	215	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+++Er RR++iN+++ L++l+P + +k + a +Le+ ++Y++sLq Manes.02G068800.1.p 168 SHSIAERVRREKINNKLRCLQDLVPGC----HKSMGMAVMLEEIINYVHSLQ 215 8***********************9....788***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	5.10E-11	162	219	No hit	No description
SuperFamily	SSF47459	3.4E-17	162	233	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.4E-16	164	226	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	15.243	164	214	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	5.1E-7	168	215	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	3.5E-9	170	220	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence Send to blast
MAEFTEYLQR LRPSQPFMEM DMNAQMFKQL PEINSSPLEN FSVPDFSVDS FLAHHQQPPP 60 DQFPASYDHC GFSSTFHQPD ILNSAPVVHA VTSTSSQNVL TNSCKKRKAD AQSISSSSKN 120 ISPTASTTNT KKKNKLGRGR KGKNKEKEVD EAEEVVHVRA KRGQATDSHS IAERVRREKI 180 NNKLRCLQDL VPGCHKSMGM AVMLEEIINY VHSLQNQVEF LSMELAAASC SYDFNLETES 240 SRKAQGTNSP GAQERQKWWR EGNGELGYFQ STWSI*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Manes.02G068800.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021603741.1	0.0	transcription factor BEE 3-like isoform X1
TrEMBL	A0A2C9WDW0	0.0	A0A2C9WDW0_MANES; Uncharacterized protein
STRING	cassava4.1_013661m	0.0	(Manihot esculenta)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF14412	12	18

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18400.1	3e-46	BR enhanced expression 1

Link Out ? help Back to Top
Phytozome	Manes.02G068800.1.p