PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.02G079700.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family G2-like
Protein Properties Length: 468aa    MW: 51581.1 Da    PI: 8.6855
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.02G079700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.74.7e-32278331255
              G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  Manes.02G079700.1.p 278 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 331
                          9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.87E-15275331IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.0E-28276331IPR009057Homeodomain-like
TIGRFAMsTIGR015571.2E-23278331IPR006447Myb domain, plants
PfamPF002498.7E-7279330IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009887Biological Processorgan morphogenesis
GO:0009944Biological Processpolarity specification of adaxial/abaxial axis
GO:0009956Biological Processradial pattern formation
GO:0010051Biological Processxylem and phloem pattern formation
GO:0010158Biological Processabaxial cell fate specification
GO:0010229Biological Processinflorescence development
GO:0048481Biological Processplant ovule development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 468 aa     Download sequence    Send to blast
MPLEGVFVEP SSKPLPDLSL HISPPNTCPS SVSNSTNNIE ADASFNLLMS RQQGIHKSNN  60
IGSIRTSDSQ AYSTELSLAH PANSFDELTR NKRNFTGVGA EDPPRNTYQQ SHHHHHLHHS  120
STHLSNLNHG VSRLDVSDGL RPIKGIPVYH NRSFPFLPSE QSRENKDPKM CFYQMPYPSS  180
SLCSPSVAPH TSSPYYIGGS GLDPLPLLKS SGPNQSLPAY NRLAPTTRFN GLSMDAFKSP  240
QLHHHHNQYG LGSGEASHGL IRSRFLPKLP TKRSMRAPRM RWTSTLHARF VHAVELLGGH  300
ERATPKSVLE LMDVKDLTLA HVKSHLQMYR TVKTTDKPAA SSGQSDGSGE EDISPMGNGN  360
DQSLRRFTGQ RGPSDGSAVQ QEIDYSSTAT TLWSNSSSSR ETWPQTNSND MDGHREAKLQ  420
TQQRSGHPVE ECNSTKLKGY LGTNLDCKNP SLEFTLGRPD WQGNERN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-16279333458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-16279333458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A2e-16279333357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-16279333357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-16279333357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-16279333357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-16279333458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-16279333458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-16279333458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-16279333458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-16279333458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-16279333458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.02G079700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021601546.10.0transcription repressor KAN1-like isoform X1
TrEMBLA0A2C9WDH30.0A0A2C9WDH3_MANES; Uncharacterized protein
STRINGcassava4.1_008805m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17563391
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16560.11e-80G2-like family protein