PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.02G085100.2.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family WRKY
Protein Properties Length: 217aa    MW: 24392.2 Da    PI: 8.5694
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.02G085100.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY35.71.7e-11171191222
                          --SS-EEEEEEE--TT-SS-E CS
                 WRKY   2 dDgynWrKYGqKevkgsefpr 22 
                          +Dgy+WrKYGqK vk+s++pr
  Manes.02G085100.2.p 171 EDGYRWRKYGQKAVKNSPYPR 191
                          8*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.5E-12155191IPR003657WRKY domain
SuperFamilySSF1182901.11E-9163192IPR003657WRKY domain
PROSITE profilePS5081113.391165191IPR003657WRKY domain
SMARTSM007743.2E-5170206IPR003657WRKY domain
PfamPF031061.4E-7171191IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MSSEEKNPFQ YNPFNYNEQR GIPAGSVFPF LNDGPSPVQT IQGSDPLYMS FTESLSMDYN  60
TLSRAFCMPA ICSSSEVISP IQAYFSREIG APAGADENTS TPDSSSISSP SNDAATQQGA  120
AGKSKEKQQP KEYEDAKENS NNKVSKKKKK EKKEREARFA FLTKSEIDHL EDGYRWRKYG  180
QKAVKNSPYP RFIPLNNSLT MHFYKAFFYF YILNVS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.02G085100.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC4852777e-31KC485277.1 Jatropha curcas WRKY transcription factor 25 (WRKY25) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021604175.11e-138probable WRKY transcription factor 71
TrEMBLA0A2C9WC281e-158A0A2C9WC28_MANES; Uncharacterized protein
STRINGcassava4.1_015949m1e-159(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29860.12e-19WRKY DNA-binding protein 71