PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.02G197900.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bHLH
Protein Properties Length: 270aa    MW: 29657.4 Da    PI: 9.2364
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.02G197900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.91.3e-06198223630
                          HHHHHHHHHHHHHHHHHHHCTSCC.C CS
                  HLH   6 nerErrRRdriNsafeeLrellPk.a 30 
                          +++Er RR ri +++ +L+el+P+ +
  Manes.02G197900.1.p 198 SIAERVRRTRISDRIRKLQELVPNmD 223
                          689********************844 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508888.975192247IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.96E-6195235IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.3E-5197234IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042335Biological Processcuticle development
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MQPTPSGSGN SSGGDGGGGE LNRGGLARFR SAPATWLEAL LEDEEEEDLL KPNQTLTQLL  60
ASNTPSTRNS VPFASSSISV EPGNLFEPTG FKRQNSSPAD FLGNSGLGSD GYFSSFGIPS  120
NYDYMSPNMD VSPSGKRARE VELHHPSGRY PSLLKGEQSG EVPSRASSLI EMEMDKLLED  180
SVPCRVRAKR GCATHPRSIA ERVRRTRISD RIRKLQELVP NMDKICWMRQ WSMLSFFKDK  240
FRNSQNIKGN ARALLKNNRN MVTATLCLL*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00181DAPTransfer from AT1G35460Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.02G197900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021603708.11e-163transcription factor bHLH81-like isoform X2
RefseqXP_021603709.11e-163transcription factor bHLH81-like isoform X2
SwissprotQ9C8P81e-68BH080_ARATH; Transcription factor bHLH80
TrEMBLA0A2C9WFJ90.0A0A2C9WFJ9_MANES; Uncharacterized protein
STRINGcassava4.1_013899m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF91323043
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35460.11e-57bHLH family protein