PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.02G208500.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family ERF
Protein Properties Length: 175aa    MW: 19131.2 Da    PI: 5.8098
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.02G208500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.92.1e-172271255
                  AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                         +ykGVr++k +g+Wv+eIr+p   g +  r +lg++ t+e Aa a++ a  +l+g
  Manes.02G208500.1.p 22 KYKGVRRRK-WGKWVSEIRVP---G-TqERLWLGSYSTPEAAAVAHDLASYCLRG 71
                         8*****998.**********8...3.35*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.7E-252185IPR001471AP2/ERF domain
SMARTSM003802.5E-272291IPR001471AP2/ERF domain
PROSITE profilePS5103221.4562285IPR001471AP2/ERF domain
SuperFamilySSF541712.35E-172275IPR016177DNA-binding domain
CDDcd000186.38E-272285No hitNo description
PfamPF008471.7E-102271IPR001471AP2/ERF domain
PRINTSPR003671.7E-82334IPR001471AP2/ERF domain
PRINTSPR003671.7E-84561IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    Send to blast
MSDATHLVNQ ESSSERASDQ RKYKGVRRRK WGKWVSEIRV PGTQERLWLG SYSTPEAAAV  60
AHDLASYCLR GQQRSSSVNS RLNFPLVLPT NLRPDMSPKS IQKVASDAGM AIDAQMILNG  120
TQSPGNESRG NASDCTILRS SEPEINLENV MSNYGETYSG DSGESLSISV EDYL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12329KGVRRRK
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.02G208500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021605766.11e-126ethylene-responsive transcription factor ERF020-like
SwissprotQ9C9I84e-43ERF20_ARATH; Ethylene-responsive transcription factor ERF020
TrEMBLA0A2C9WFS41e-125A0A2C9WFS4_MANES; Uncharacterized protein
STRINGcassava4.1_025002m1e-126(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54893054
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.11e-45ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]