PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.03G001600.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bZIP
Protein Properties Length: 303aa    MW: 33747.3 Da    PI: 5.0439
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.03G001600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_152.98.1e-17148202357
                          XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                          +l+r rr+ +NRe+ArrsR+RK+a +  Le  v+eL++eN +L k+l   ++++ 
  Manes.03G001600.1.p 148 DLRRIRRMVSNRESARRSRKRKQAHLHDLESQVEELTGENASLYKQLLVATQQYR 202
                          689*****************************************99987777776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.3E-13144200No hitNo description
SMARTSM003385.2E-18146210IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.289148194IPR004827Basic-leucine zipper domain
PfamPF001703.3E-14149194IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.5E-13149201No hitNo description
CDDcd147023.58E-19151202No hitNo description
PROSITE patternPS000360153168IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MLGSRKEWSR GKQEAEMKGS ESEVALQEAI NKTQFYKPEE EMKGNRDNSL SAELEVEGLF  60
GDDFSFCFKT LDMINGLSSC GLTESFEAWS HSQQKSSKQS SIDAQSSVCV SDYNKPKQTR  120
VSSSGSSDDE EEVEIEAGPC EQSTNPTDLR RIRRMVSNRE SARRSRKRKQ AHLHDLESQV  180
EELTGENASL YKQLLVATQQ YRDADTNNRV LKSDVEALRA KVKLAEDMVT RGSLTCNMNE  240
VVQNHLTSPQ SLNNHNLRVS PTITINREDA SSYVGGLTIS GPGIDNLNNV NLRNSCVSEL  300
WP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1162168RRSRKRK
2162169RRSRKRKQ
3164169SRKRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.03G001600.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by glucose. {ECO:0000269|PubMed:18841482}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021608181.10.0basic leucine zipper 9-like
SwissprotQ9FUD38e-60BZIP9_ARATH; Basic leucine zipper 9
TrEMBLA0A2C9W3880.0A0A2C9W388_MANES; Uncharacterized protein
STRINGcassava4.1_012780m1e-111(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41953458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.11e-54basic leucine zipper 9
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Ortiz-Espín A, et al.
    Mitochondrial AtTrxo1 is transcriptionally regulated by AtbZIP9 and AtAZF2 and affects seed germination under saline conditions.
    J. Exp. Bot., 2017. 68(5): p. 1025-1038
    [PMID:28184497]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  4. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]