PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.03G098000.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family ERF
Protein Properties Length: 289aa    MW: 32246.1 Da    PI: 8.1054
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.03G098000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.63.5e-193585155
                  AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         s++ GVr+++ +g+WvAeI+d +   ++ r +lg+f+taeeAa+a+++a+  l+g
  Manes.03G098000.1.p 35 SKFVGVRQRP-SGKWVAEIKDTT---QKIRMWLGTFDTAEEAARAYDEAACLLRG 85
                         79********.7*********32...35**********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.37E-333592No hitNo description
PfamPF008471.9E-133585IPR001471AP2/ERF domain
SuperFamilySSF541714.12E-203594IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.3E-283693IPR001471AP2/ERF domain
PROSITE profilePS5103219.8093693IPR001471AP2/ERF domain
SMARTSM003804.4E-383699IPR001471AP2/ERF domain
PRINTSPR003673.8E-83748IPR001471AP2/ERF domain
PRINTSPR003673.8E-85975IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000302Biological Processresponse to reactive oxygen species
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009723Biological Processresponse to ethylene
GO:0035865Biological Processcellular response to potassium ion
GO:0048528Biological Processpost-embryonic root development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MECKSQKQPQ GISFSPIKHS RLKERTTATK SNCRSKFVGV RQRPSGKWVA EIKDTTQKIR  60
MWLGTFDTAE EAARAYDEAA CLLRGSNTRT NFTTHIPPNS PISIKIRNLL NQKKSLKQNS  120
PANSTSKTTI KPSTIVSNNK SSIRSSSNDN FLSNSSNDIF QSGNGIGMKQ ENYQTFNDVY  180
RPDVSGCVEG LELGGSSQFY CSSWPFPTGF DQLPLMEEGF ELQKNVGLLP DAARELETAE  240
FERMKVERQI SASLYAMSGV DEYLENVNYD PSEALWDFST LSHLFCLS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-1535921371Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00521DAPTransfer from AT5G19790Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.03G098000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021605904.10.0ethylene-responsive transcription factor RAP2-11-like
TrEMBLA0A2C9W6170.0A0A2C9W617_MANES; Uncharacterized protein
STRINGcassava4.1_028399m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33413069
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.13e-34related to AP2 11