PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.03G163100.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family C2H2
Protein Properties Length: 191aa    MW: 21613.8 Da    PI: 8.2169
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.03G163100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.20.000572343323
                         ETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
                         C +C+ +F ++  L  Hi +H
  Manes.03G163100.1.p 23 CRICNHVFMSSQALIEHIESH 43
                         ******************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.3282148IPR007087Zinc finger, C2H2
PROSITE patternPS0002802343IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MAGYGWNLNL CPKRPYAPPP IACRICNHVF MSSQALIEHI ESHMADEDPN SRRPQNLISC  60
QRNPFANPSS QASLPPTLPF TPNSYSQLAS NFQERNPIFS SSPQMIVSMR PTSQPQISLM  120
GVRNSWSHQV PFPPQLQRKM MMMEDPPSCD FTKPLLQQLE KPFPYKIELK GINDNRNSSD  180
LDMLDLTLKL *
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.03G163100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2C9W9J21e-136A0A2C9W9J2_MANES; Uncharacterized protein
STRINGcassava4.1_025807m1e-137(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14890812