PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.03G169100.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bHLH
Protein Properties Length: 237aa    MW: 27250.2 Da    PI: 9.3119
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.03G169100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.22e-0580124554
                          HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                           ++ Er RR++ ++++  L  +lP       ++++K +i ++A + I +L
  Manes.03G169100.1.p  80 RKISERMRREKEKNGYLALHAMLPLG-----TRNDKNSIMQMAAKRIDEL 124
                          4799********************97.....7999999******999988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.63E-1072140IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.1675124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.16E-579126No hitNo description
SMARTSM003537.2E-481130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.5E-581142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    Send to blast
MDLFFQELQS EDAFWYDLVP LNQSAFLPYT STPTREIPAT CSFNGSNSTN MNKRMIGFMG  60
RSWPVRIETE ESDSARCYRR KISERMRREK EKNGYLALHA MLPLGTRNDK NSIMQMAAKR  120
IDELKRYKEV LERRNYELEE KGGNARSRKI EFKVRNPTSG IDYMVEVLKC LNSLGSKLIS  180
IKSRYSDEEL VAVMDIETQI SDAEMGKAVQ TTLQNVQRKH SKETSAAFCL KLTLTT*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.03G169100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021607763.11e-177transcription factor bHLH92
TrEMBLA0A2C9W8531e-176A0A2C9W853_MANES; Uncharacterized protein
STRINGcassava4.1_028613m1e-177(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF125722734
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.11e-38bHLH family protein