PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.04G031100.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family C2H2
Protein Properties Length: 163aa    MW: 17763.8 Da    PI: 9.7421
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.04G031100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.10.000681103123
                          EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                          ++C++Cg  F+    L  H+r+H
  Manes.04G031100.1.p  81 HECSICGLEFPVGQALGGHMRRH 103
                          78********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.24E-836103No hitNo description
PfamPF139122.4E-103862IPR007087Zinc finger, C2H2
SMARTSM003550.363860IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.0973865IPR007087Zinc finger, C2H2
PROSITE patternPS0002804060IPR007087Zinc finger, C2H2
PfamPF139128.8E-1180105IPR007087Zinc finger, C2H2
SMARTSM003550.1481103IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.24581105IPR007087Zinc finger, C2H2
PROSITE patternPS00028083103IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    Send to blast
MKREREEAGG TELALDMANC LMLLSKVGQT EAPTGRLFAC KTCNRKFTSF QALGGHRASH  60
KKPKLIGDDL LTSSPPKPKT HECSICGLEF PVGQALGGHM RRHRGGIGKN MDDARPLFPV  120
PVMKKSTSKR VLCLDLNLTP VENDLTLQLG KIVQTSVFNC YI*
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in stress responses. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.04G031100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021610903.11e-117zinc finger protein ZAT11-like
SwissprotQ9SLD46e-43ZAT11_ARATH; Zinc finger protein ZAT11
TrEMBLA0A2C9VZ881e-116A0A2C9VZ88_MANES; Uncharacterized protein
STRINGcassava4.1_017982m1e-117(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF31634175
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.14e-37C2H2 family protein