PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.04G157200.2.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bZIP
Protein Properties Length: 341aa    MW: 37646 Da    PI: 5.7246
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.04G157200.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.48.3e-10180220545
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                          k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Manes.04G157200.2.p 180 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 220
                          7889************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.4E-8170223No hitNo description
SMARTSM003389.5E-7176239IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415178222IPR004827Basic-leucine zipper domain
CDDcd147088.50E-25180232No hitNo description
SuperFamilySSF579594.69E-7180223No hitNo description
PfamPF001706.4E-7180220IPR004827Basic-leucine zipper domain
PROSITE patternPS000360183198IPR004827Basic-leucine zipper domain
PfamPF141441.3E-30262335IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MGSRVGLEDE KEANGMLSFD PQLPISNALG IEGSTIHPYR VSGFGLFEQS VAFHFEDVVD  60
LSTNTVFNSA KASSQEVSSD PLNIGTSDKL TTSLNINPSA AQVESQRLPP EKKQQLNLVS  120
ISSGNTENWG ESNMADASPR TDISTDGDTD DKNPRFAYGQ SNAVAVSDSS DRSKDKLDQK  180
TLRRLAQNRE AARKSRLRKK AYVQQLESSR LKLTQLEQEL QRARQQGVFI SSSGDQAHSM  240
SGNGAMAFDV EYARWLEEQN RQINELRSAV NTHAGDTELR IIIDGIMAHY DEIFRLKGNA  300
AAADVFHLLS GMWKTPAERC FLWLGGFRSS ELLKVRLVML *
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.04G157200.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021609868.10.0transcription factor TGA6-like isoform X1
RefseqXP_021609869.10.0transcription factor TGA6-like isoform X1
SwissprotQ6IVC21e-131TGAL1_ORYSJ; Transcription factor TGAL1
TrEMBLA0A2C9W3200.0A0A2C9W320_MANES; Uncharacterized protein
STRINGcassava4.1_007074m0.0(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-97TGACG motif-binding factor 6
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]