PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.05G040000.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family ERF
Protein Properties Length: 303aa    MW: 33130.7 Da    PI: 8.8822
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.05G040000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.73.8e-202979256
                  AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                         ++ GVr+++ +grWvAeI+d s   +r r +lg+++t+eeAa+a+++a+++l+ge
  Manes.05G040000.1.p 29 RFVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDTPEEAARAYDEAARALRGE 79
                         589******.7*********43...36**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.33E-322986No hitNo description
SMARTSM003805.4E-372992IPR001471AP2/ERF domain
PfamPF008473.7E-152979IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.1E-282986IPR001471AP2/ERF domain
PROSITE profilePS5103220.5342986IPR001471AP2/ERF domain
PRINTSPR003673.0E-73041IPR001471AP2/ERF domain
SuperFamilySSF541714.64E-203086IPR016177DNA-binding domain
PRINTSPR003673.0E-75268IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MAEVEKLKNS SAATTKTTNM EQPNKAVRRF VGVRQRPSGR WVAEIKDSSQ RVRLWLGTYD  60
TPEEAARAYD EAARALRGEN ARTNFALVNN NNNNPHYSNT AQSGLSPTNG GLVSESDGRH  120
SLSFSSLKAK LSKNLQSIMA RTTESKSTKN RVSDHFTFAR IFHFRSQQYQ KPVDIKNIEK  180
VVQPSIIVPR VANEHEQSSW ETSSVSDCSN EWIGFRQQGL DSDGSDIGEV SIGDQGLKDQ  240
MMVSGCSGEG SRSKRFKVSS TVMVPPTFSH GSPSFCGSPN FCGSPCFCGS PSFCGSPFHG  300
EN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-1429851471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.05G040000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021611474.10.0uncharacterized protein LOC110614280
TrEMBLA0A2C9VT610.0A0A2C9VT61_MANES; Uncharacterized protein
STRINGcassava4.1_028498m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF83243143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-16related to AP2 11