PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.05G106400.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family ERF
Protein Properties Length: 369aa    MW: 41238.7 Da    PI: 4.488
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.05G106400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.11.3e-194392255
                  AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         +y GVr+++ +grWvAeI+d +    ++ r++lg+++taeeAa+a+++a+  l+g
  Manes.05G106400.1.p 43 RYVGVRQRP-SGRWVAEIKDtV----QKIRVWLGTYDTAEEAARAYDEAACLLRG 92
                         79*******.7*********55....35**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.53E-314299No hitNo description
Gene3DG3DSA:3.30.730.101.1E-274399IPR001471AP2/ERF domain
PfamPF008473.3E-144392IPR001471AP2/ERF domain
PROSITE profilePS5103219.94143100IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-1943100IPR016177DNA-binding domain
SMARTSM003804.2E-3443106IPR001471AP2/ERF domain
PRINTSPR003673.4E-84455IPR001471AP2/ERF domain
PRINTSPR003673.4E-86682IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    Send to blast
MTKKRKASHL HKGEAHAEKE DVAWDQVMEA AAALGGAWRA RKRYVGVRQR PSGRWVAEIK  60
DTVQKIRVWL GTYDTAEEAA RAYDEAACLL RGANTRTNFW PCSSSHYKPA LPSKITNRLL  120
KRLRERNNSL STSLPVSLQE QEASKVEETQ FDNFFDQLPA EDCGICEDNN SDTSGGDYMS  180
GFFETNFSRT EVCDWSNADE EAVKEKGEQE EEINEPWVVD FPLEDVAGGS SSTNCSPFDI  240
TQEMMAMGPM EQQEYYYGDD QSMLKNIMKR LNYERKFSAS LYAYNGVSEC LSLTFGSAAN  300
SDELPSKLRI INSNNKNEKD GKEEVQEFGI ISAAQTATEE MGSRSSAMEG GESSLWSSLD  360
LPPICFIV*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.05G106400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021611473.10.0uncharacterized protein LOC110614279
TrEMBLA0A2C9VV160.0A0A2C9VV16_MANES; Uncharacterized protein
STRINGcassava4.1_024647m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33383267
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-18related to AP2 11