PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.05G148300.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family C2H2
Protein Properties Length: 407aa    MW: 44459.6 Da    PI: 9.3956
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.05G148300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.00027171193223
                          EETTTTEEESSHHHHHHHHHH.T CS
              zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                           C+ Cg+ F+ +++L+ H+ + H
  Manes.05G148300.1.p 171 ACSQCGELFPKPESLELHQIVrH 193
                          6******************9877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280170193IPR007087Zinc finger, C2H2
SuperFamilySSF563991.34E-27195402No hitNo description
Gene3DG3DSA:3.90.228.103.9E-14198402IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 407 aa     Download sequence    Send to blast
MALLTFLQEQ TKNGKQISKR KRKQQKQKEK QPSSWDQIKN LLTCKQIEVS GVHDPSKKTN  60
GYSKMGSSCS SICSFRDVVH GNTRVVHRAD NSPESSTVGQ ETGLLSRKAA NGSSTRSLGS  120
SGRSNGGATY TSSSRAIQFR KLSGCYECHM IVDPSRAENF RYPSARTTIC ACSQCGELFP  180
KPESLELHQI VRHAVLELGP EDSGRNIVEI IFKSSWLKKD NSICKIERIL KVQNTQRTIQ  240
RFEDSRDAIK TRALNSTKKN PRCAADGNEL LRFHCTSLTC SLGARGTSNL CGSIPGCGVC  300
TIIRHGFQGK ECKGIRTTAS SGRAHDSFVC CTDGRRAMLV CRVIAGRVKR LADDAPPPEE  360
DVASAGGSYD SVAGYPGIYS NLEELFVFNP KAILPCFVVI YSALES*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.05G148300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021611778.10.0uncharacterized protein LOC110614530
TrEMBLA0A2C9VXQ30.0A0A2C9VXQ3_MANES; Uncharacterized protein
STRINGcassava4.1_008876m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF103413037
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-159C2H2-like zinc finger protein