PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Manes.05G174500.1.p

Organism

Manihot esculenta

Taxonomic ID

3983

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot

Family

bZIP

Protein Properties

Length: 417aa MW: 45292.7 Da PI: 10.383

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Manes.05G174500.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	46	1.2e-14	338	389	5	56
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +r+rr++kNRe+A rsR+RK+a++ eLe +v+++++eN++L+k+ e+ ++ Manes.05G174500.1.p 338 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKIKEENRELQKKQAEIMEMQ 389 79****************************************9999888875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	8.4E-13	334	399	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.99	336	387	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.75E-10	338	387	No hit	No description
CDD	cd14707	8.29E-25	338	392	No hit	No description
Pfam	PF00170	1.9E-12	338	390	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	9.5E-14	338	387	No hit	No description
PROSITE pattern	PS00036	0	341	356	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence Send to blast
MGTHLNFKNF HNNPTSDAGV GGGSGSRPSG NFPLARQPSV YSLTFDEFQS TMGGIGKEFG 60 SMNMDELLKN IWSAEETQNV VASSTGAQEG LQRQGSLTLP RTLSQKTVDE VWKDMSKEYG 120 NGGGTGGANL PQRQQTLGEI TLEEFLVKAG VVREDAQLAA KLNANGGFFG DLSRTGNSST 180 LGVGLQQNRG LGLDNNNTNQ ISMRSTNLPL NVNGVRSNQA QVHQQHQQQQ QQQQQQQQLF 240 PKQPNLGYVT QMPLQTSPGI RGGIMGIGDQ GISGLMQAGA LGMVGLGVAT ESPANKLSSN 300 GITKSNGDTS SVSPVPYVFN GGLRGRRANG AVEKVVERRQ RRMIKNRESA ARSRARKQAY 360 TMELEAEVAK IKEENRELQK KQAEIMEMQK NQVLEMMNEQ QGVKRRCLRR TQTGPW*

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence Send to blast

MGTHLNFKNF HNNPTSDAGV GGGSGSRPSG NFPLARQPSV YSLTFDEFQS TMGGIGKEFG  60
SMNMDELLKN IWSAEETQNV VASSTGAQEG LQRQGSLTLP RTLSQKTVDE VWKDMSKEYG  120
NGGGTGGANL PQRQQTLGEI TLEEFLVKAG VVREDAQLAA KLNANGGFFG DLSRTGNSST  180
LGVGLQQNRG LGLDNNNTNQ ISMRSTNLPL NVNGVRSNQA QVHQQHQQQQ QQQQQQQQLF  240
PKQPNLGYVT QMPLQTSPGI RGGIMGIGDQ GISGLMQAGA LGMVGLGVAT ESPANKLSSN  300
GITKSNGDTS SVSPVPYVFN GGLRGRRANG AVEKVVERRQ RRMIKNRESA ARSRARKQAY  360
TMELEAEVAK IKEENRELQK KQAEIMEMQK NQVLEMMNEQ QGVKRRCLRR TQTGPW*

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Manes.05G174500.1.p

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021612263.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 5
Refseq	XP_021612264.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 5
Swissprot	Q9M7Q4	1e-133	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A2C9VX77	0.0	A0A2C9VX77_MANES; Uncharacterized protein
STRING	cassava4.1_010216m	0.0	(Manihot esculenta)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1962	34	81

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	1e-120	abscisic acid responsive elements-binding factor 2

Link Out ? help Back to Top
Phytozome	Manes.05G174500.1.p

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]