PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.05G183200.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bZIP
Protein Properties Length: 155aa    MW: 18007.5 Da    PI: 10.3083
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.05G183200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.19e-1459109555
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                          ++ rr+++NRe+ArrsR RKk+ +e+L+  v  Le++N++Lkk+l +   +
  Manes.05G183200.1.p  59 RKRRRMISNRESARRSRWRKKKHLENLTVQVNRLETQNRELKKRLGSVLGQ 109
                          5789****************************************9876555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.9E-1455126IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.88757106IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.3E-1157110No hitNo description
SuperFamilySSF579594.71E-1259114No hitNo description
PfamPF001705.9E-1259111IPR004827Basic-leucine zipper domain
CDDcd147023.82E-1760111No hitNo description
PROSITE patternPS0003606277IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    Send to blast
MLFAQDPVQL QYPLPETGFT APEIEELLSL FELPIHSPNS GSEGSNSNSN RVIFSVDERK  60
RRRMISNRES ARRSRWRKKK HLENLTVQVN RLETQNRELK KRLGSVLGQC HVLWRENDRL  120
TTEYLSLQAR LQDLCHAIVV MHDFQRPKQL SSSI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15862RKRRR
26079RRRMISNRESARRSRWRKKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.05G183200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021649733.12e-77basic leucine zipper 4-like
TrEMBLA0A2C9VXE51e-109A0A2C9VXE5_MANES; Uncharacterized protein
STRINGcassava4.1_031242m1e-110(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF59963052
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.11e-22basic leucine-zipper 5