PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.06G086600.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family NAC
Protein Properties Length: 183aa    MW: 21180.1 Da    PI: 7.6982
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.06G086600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM87.42.6e-27121511128
                  NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev..ikevdiykvePwdLpk.......kvkaeekewyfFskrdkkyatgkrknr.atk. 79 
                          lp+G++F Ptdeelv +yL +k+ ++ l+++ +  i+  + y+  P++L         + + +e+ewyfF+++++    ++r++  ++  
  Manes.06G086600.1.p  12 LPVGYKFLPTDEELVIHYLMNKLLNRLLPANIApdIDASEFYSKPPNSLSVsfplsmvSPSCGEREWYFFIHEHEDFLGKSRERIrMVGd 101
                          799***********************98775544588889*********8446776543333899******9999887655554324444 PP

                  NAM  80 .sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                           +g+W+++g +k + +++g++   k  + +++g++ +++kt+W m++yrl
  Manes.06G086600.1.p 102 gTGFWRSSGLEKYIRNSDGRVLAFKSRFFYFSGNDANAKKTHWKMDQYRL 151
                          5899********************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.11E-3010172IPR003441NAC domain
PROSITE profilePS5100531.78612175IPR003441NAC domain
PfamPF023651.3E-1613151IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MDHKIDEILA QLPVGYKFLP TDEELVIHYL MNKLLNRLLP ANIAPDIDAS EFYSKPPNSL  60
SVSFPLSMVS PSCGEREWYF FIHEHEDFLG KSRERIRMVG DGTGFWRSSG LEKYIRNSDG  120
RVLAFKSRFF YFSGNDANAK KTHWKMDQYR LHNQCPAPDH NSKDEQWVLG KLKRGMEINS  180
SF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A8e-17715110140Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.06G086600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021614614.11e-126NAC transcription factor 29-like, partial
TrEMBLA0A2C9VQJ91e-134A0A2C9VQJ9_MANES; Uncharacterized protein
STRINGcassava4.1_023947m1e-118(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF144391218
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.14e-21NAC-domain protein 101