PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.06G092000.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family Nin-like
Protein Properties Length: 135aa    MW: 15826.6 Da    PI: 9.5029
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.06G092000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK44.33.4e-141262752
               RWP-RK 27 vclTvLKriCRqyGIkRWPhRkiksl 52
                         ++lT+LK++CR++GI+RWPhRk+ sl
  Manes.06G092000.1.p  1 MGLTLLKKRCRELGIRRWPHRKLMSL 26
                         689********************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151912.855146IPR003035RWP-RK domain
PfamPF020422.7E-10226IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    Send to blast
MGLTLLKKRC RELGIRRWPH RKLMSLQTLI KNVQEMKKVE GKESEEKLRE AIEILESERK  60
MLEEIPDLQL EHKTKRLRQA CFKSNYKKRK LMAMMSRPSS SSGAIDYYGQ INEDEDEEIK  120
SLLADPVCHP TMMF*
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.06G092000.1.p
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021616608.13e-94protein RKD2-like, partial
SwissprotQ9M9U91e-39RKD1_ARATH; Protein RKD1
TrEMBLA0A2C9VRN79e-93A0A2C9VRN7_MANES; Uncharacterized protein
STRINGXP_002514752.15e-57(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF61843052
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.16e-42RWP-RK domain-containing protein