PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.06G131300.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family ERF
Protein Properties Length: 213aa    MW: 23612.2 Da    PI: 5.9055
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.06G131300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.43e-17115165255
                  AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                          +y+GVr+++ +g+++AeIrdp   + k  r++lg+f++  +Aaka++ a+ +l+g
  Manes.06G131300.1.p 115 HYRGVRRRP-WGKFAAEIRDP---NrKGSRVWLGTFDSDVDAAKAYDFAAFRLRG 165
                          8********.**********9...6566**********99*************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.2E-30114174IPR001471AP2/ERF domain
CDDcd000181.46E-28114173No hitNo description
PROSITE profilePS5103224.46115173IPR001471AP2/ERF domain
PfamPF008475.7E-12115165IPR001471AP2/ERF domain
SMARTSM003805.6E-34115179IPR001471AP2/ERF domain
SuperFamilySSF541714.58E-22115174IPR016177DNA-binding domain
PRINTSPR003674.9E-13116127IPR001471AP2/ERF domain
PRINTSPR003674.9E-13155175IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    Send to blast
MATPTASPDE SSALECIRQH LLGDFTSTEV FFTDLDSHIS THSHILRPIK LENYDFLSAS  60
ESNSPVSGHI GTCNFQPKIE LVDLTSPEPP ASLKHSPPEE PLSDPKPTDE EESKHYRGVR  120
RRPWGKFAAE IRDPNRKGSR VWLGTFDSDV DAAKAYDFAA FRLRGRKAIL NFPLEAGRAD  180
PPAKAGRKRR TVDRAEVTQD SGELSSVDWN LD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A9e-28112174264ATERF1
3gcc_A9e-28112174264ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.06G131300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021616767.11e-155ethylene-responsive transcription factor ERF107-like
TrEMBLA0A2C9VQI71e-154A0A2C9VQI7_MANES; Uncharacterized protein
STRINGcassava4.1_015180m2e-98(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF52573056
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.11e-44ERF family protein