PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.06G140500.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bHLH
Protein Properties Length: 235aa    MW: 26509.3 Da    PI: 10.3173
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.06G140500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.74.4e-1366118155
                          CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                          +++ h  +Er+RR+++ + ++ Lr+llP       ++K s ++   +Av+YI++Lq
  Manes.06G140500.1.p  66 KKKLHRDIERQRRQEMATLYASLRSLLPLqY---IKGKRSISDHMNEAVNYINHLQ 118
                          6889*************************66...*********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.53E-1462136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.71E-1163122No hitNo description
PROSITE profilePS5088813.80865117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.6E-1066118IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.2E-1066136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.001471123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    Send to blast
MFPLHQGNEL CFQISSNHPH KIPQDLILSN PALYGSDITD DLGKSRRRKS ISKDNDGTAE  60
NNDNDKKKLH RDIERQRRQE MATLYASLRS LLPLQYIKGK RSISDHMNEA VNYINHLQKR  120
IKKLGVKRDA LKQQTNLREI PQRSGSSNKT SPGTRVIIRP RLGGIEIVFS SGFGEQGFTL  180
SRVLQLLLEV ELSVVNCVST KVNERVLHTV QAEVKDPTCL NLSELQQKLN PLVP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14449SRRRKS
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.06G140500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021616905.11e-172transcription factor bHLH126-like
TrEMBLA0A2C9VQV41e-170A0A2C9VQV4_MANES; Uncharacterized protein
STRINGcassava4.1_015229m1e-171(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF79233125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.13e-40bHLH family protein