PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.06G140700.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bHLH
Protein Properties Length: 207aa    MW: 22836.9 Da    PI: 6.7627
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.06G140700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.24e-103280555
                         HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH  5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                          +e+Er+RR+++ +  + Lr+llP  +    ++K   ++   +A +YIk+Lq
  Manes.06G140700.1.p 32 RKEIERQRRQQMSTLCASLRSLLPLeS---LKGKRAISDHINEAAKYIKDLQ 80
                         589**********************65...99*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.44E-122695IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.1762779IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.43E-92784No hitNo description
Gene3DG3DSA:4.10.280.102.6E-93295IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.2E-43385IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.3E-73380IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    Send to blast
MGDGQPQPPA ILANSNTKND VGFSCDDKKI IRKEIERQRR QQMSTLCASL RSLLPLESLK  60
GKRAISDHIN EAAKYIKDLQ NNVQELSVTR DKLKHLLNST SLDDQGNEIS SLDNLMNNTV  120
TVLSRVSGVE IVVSSESGEG NFLLSRVLEA VIEEGFEVVS CISTKRDGRL YNTMQCQTSH  180
LTCIDVAALQ QKLNDVILSS RFISRS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.06G140700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021617123.11e-149transcription factor bHLH126-like
TrEMBLA0A2C9VQU51e-147A0A2C9VQU5_MANES; Uncharacterized protein
STRINGcassava4.1_027962m1e-147(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF79233125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.11e-26bHLH family protein