PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.08G022000.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family ERF
Protein Properties Length: 203aa    MW: 22777.9 Da    PI: 7.138
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.08G022000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.62e-153685155
                  AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         + ykGVr++  +g+Wv+e+r p++   + r++lg+f  +++Aa+a++ a+++l+g
  Manes.08G022000.1.p 36 PVYKGVRQR--NGKWVSELRQPYS---KSRIWLGTFSKPDMAARAYDVAALALRG 85
                         68****975..6*********754...5*************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.5E-93685IPR001471AP2/ERF domain
PROSITE profilePS5103219.1373793IPR001471AP2/ERF domain
SMARTSM003801.3E-283799IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.5E-273795IPR001471AP2/ERF domain
SuperFamilySSF541715.95E-183795IPR016177DNA-binding domain
PRINTSPR003671.8E-73849IPR001471AP2/ERF domain
CDDcd000181.71E-283895No hitNo description
PRINTSPR003671.8E-77595IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
MEKVSSSTSN FKQANLKMVT QKRKAGRKKF HETRHPVYKG VRQRNGKWVS ELRQPYSKSR  60
IWLGTFSKPD MAARAYDVAA LALRGDSASL NFPESTHLLP HIESTSIRDI RHAALEAAAQ  120
SCVHVDQCCS LSCCCTSMKS DEIEEACERK VAFLDEEELF NMPGLLNSMA EGLILTPPAM  180
KRGFSWNDEE DDHPVDLTLW SD*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.08G022000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021619158.11e-152dehydration-responsive element-binding protein 1B-like
TrEMBLA0A2C9VF151e-150A0A2C9VF15_MANES; Uncharacterized protein
STRINGcassava4.1_017111m1e-135(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24333224
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.11e-39C-repeat/DRE binding factor 2