PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.08G065000.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family NAC
Protein Properties Length: 255aa    MW: 28328.3 Da    PI: 8.8243
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.08G065000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM79.47.7e-2591494128
                  NAM   4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.........................kvkaeekewyfFskrdkk 67 
                          G   +P+d+elv + L++ + ++  +    i+ ++i+ +ePw+Lp k                          v+++++ewyf  +++k 
  Manes.08G065000.1.p   9 GALIRPKDKELV-NLLAEIILTDYEDP--RIPVININAHEPWELPsKsiclmhfflistilmiyyacaglsgVVNSNDREWYFLRPSQK- 94 
                          56679*******.77888877776444..5***************549****************999999987788999****998866. PP

                  NAM  68 yatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                               r++r+t++gyWk++g   ++++ +ge++g+k++Lv+++gr+p+g++t+Wv+hey++
  Manes.08G065000.1.p  95 -----RNRRTTAAGYWKTSGYGSRIKE-RGEEIGTKTILVYHTGRTPTGVRTRWVIHEYNA 149
                          .....7899*****************9.9999***************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100528.7976167IPR003441NAC domain
PfamPF023652.0E-1311148IPR003441NAC domain
SuperFamilySSF1019419.15E-2175167IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MANPIPDAGA LIRPKDKELV NLLAEIILTD YEDPRIPVIN INAHEPWELP SKSICLMHFF  60
LISTILMIYY ACAGLSGVVN SNDREWYFLR PSQKRNRRTT AAGYWKTSGY GSRIKERGEE  120
IGTKTILVYH TGRTPTGVRT RWVIHEYNAT CLPDVLRSFI LCKVMDKSDG GGNSPNYIEG  180
ETGSDSNLMT DNSAYQATVN GTPQQVKEKN KLSFLQRIHA KIINHHELIN AYSSGILSTG  240
SRATAVSGLL GRLE*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.08G065000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021620021.11e-153NAC domain-containing protein 69-like isoform X1
RefseqXP_021620022.11e-153NAC domain-containing protein 69-like isoform X1
TrEMBLA0A2C9VDY70.0A0A2C9VDY7_MANES; Uncharacterized protein
STRINGcassava4.1_023870m1e-112(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2782623
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01520.15e-25NAC domain containing protein 67