PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Manes.08G065000.2.p

Organism

Manihot esculenta

Taxonomic ID

3983

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot

Family

NAC

Protein Properties

Length: 232aa MW: 25776.2 Da PI: 9.2608

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Manes.08G065000.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	86.7	4.3e-27	9	126	4	128
NAM 4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 G +P+d+elv + L++ + ++ + i+ ++i+ +ePw+Lp+ v+++++ewyf +++k r++r+t++gyWk++g Manes.08G065000.2.p 9 GALIRPKDKELV-NLLAEIILTDYEDP--RIPVININAHEPWELPRlsgVVNSNDREWYFLRPSQK------RNRRTTAAGYWKTSGYGS 89 56679*****.77888877776444..5**********955667788999998866......7899********** PP NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++ +ge++g+k++Lv+++gr+p+g++t+Wv+hey++ Manes.08G065000.2.p 90 RIKE-RGEEIGTKTILVYHTGRTPTGVRTRWVIHEYNA 126 9.9999**************************85 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	31.912	6	144	IPR003441	NAC domain
Pfam	PF02365	5.0E-14	11	125	IPR003441	NAC domain
SuperFamily	SSF101941	1.31E-28	13	144	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 232 aa Download sequence Send to blast
MANPIPDAGA LIRPKDKELV NLLAEIILTD YEDPRIPVIN INAHEPWELP RLSGVVNSND 60 REWYFLRPSQ KRNRRTTAAG YWKTSGYGSR IKERGEEIGT KTILVYHTGR TPTGVRTRWV 120 IHEYNATCLP DVLRSFILCK VMDKSDGGGN SPNYIEGETG SDSNLMTDNS AYQATVNGTP 180 QQVKEKNKLS FLQRIHAKII NHHELINAYS SGILSTGSRA TAVSGLLGRL E*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	2e-15	9	145	20	166	NO APICAL MERISTEM PROTEIN
1ut4_B	2e-15	9	145	20	166	NO APICAL MERISTEM PROTEIN
1ut7_A	2e-15	9	145	20	166	NO APICAL MERISTEM PROTEIN
1ut7_B	2e-15	9	145	20	166	NO APICAL MERISTEM PROTEIN
3swm_A	2e-15	9	145	23	169	NAC domain-containing protein 19
3swm_B	2e-15	9	145	23	169	NAC domain-containing protein 19
3swm_C	2e-15	9	145	23	169	NAC domain-containing protein 19
3swm_D	2e-15	9	145	23	169	NAC domain-containing protein 19
3swp_A	2e-15	9	145	23	169	NAC domain-containing protein 19
3swp_B	2e-15	9	145	23	169	NAC domain-containing protein 19
3swp_C	2e-15	9	145	23	169	NAC domain-containing protein 19
3swp_D	2e-15	9	145	23	169	NAC domain-containing protein 19
4dul_A	2e-15	9	145	20	166	NAC domain-containing protein 19
4dul_B	2e-15	9	145	20	166	NAC domain-containing protein 19

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Manes.08G065000.2.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021620023.1	1e-134	NAC domain-containing protein 69-like isoform X2
TrEMBL	A0A2C9VE39	1e-170	A0A2C9VE39_MANES; Uncharacterized protein
STRING	cassava4.1_023870m	1e-118	(Manihot esculenta)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01550.1	3e-29	NAC domain containing protein 69

Link Out ? help Back to Top
Phytozome	Manes.08G065000.2.p