PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.08G085800.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family HB-other
Protein Properties Length: 248aa    MW: 27495.7 Da    PI: 6.8808
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.08G085800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox26.51.1e-08771141954
                          HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
             Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                          Fe   ++yp+  +++ LAk++g++ +qV++WF N + k
  Manes.08G085800.1.p  77 FEHflHPYPTDIDKQILAKQTGVSRSQVSNWFINAKEK 114
                          5544589***************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.607.7E-1862125IPR009057Homeodomain-like
SMARTSM003890.003469122IPR001356Homeobox domain
SuperFamilySSF466891.15E-1173126IPR009057Homeodomain-like
PfamPF059206.6E-1675111IPR008422Homeobox KN domain
CDDcd000862.06E-876114No hitNo description
PROSITE profilePS5007110.36577118IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    Send to blast
MQTVVASFEC VAGLGNLEFT SKDRLSHGKE EATRFGNIDR GRFVEGSVQN FGFIEQQPVW  60
RPQRGLSERT VPRAWLFEHF LHPYPTDIDK QILAKQTGVS RSQVSNWFIN AKEKQDANKS  120
SHQLPLSNSI ASDNPSTSIQ RFQDILSYCT RNYLPDLPLG NEEQLNSSYN SMLSHPPLGV  180
CISAAGGSSS VSLTLALHQN NAIGLSEPFS MNATQRFGLR VESSEGFDMG SFEAQNRHFG  240
RDVIVKI*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.08G085800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021651526.11e-117BEL1-like homeodomain protein 9
TrEMBLA0A2C9VEK30.0A0A2C9VEK3_MANES; Uncharacterized protein
STRINGcassava4.1_003548m1e-109(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF28103373
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02030.11e-32TALE family protein