PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Manes.08G096400.1.p

Organism

Manihot esculenta

Taxonomic ID

3983

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot

Family

BES1

Protein Properties

Length: 104aa MW: 12027.8 Da PI: 10.8307

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Manes.08G096400.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	126.1	4.3e-39	33	100	3	70
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr 70 + r p+ Er nnk+RERrRRa++ ki+aGLR++Gnyklpk+aD n+ lkALc+eAGw ve+DGt yr Manes.08G096400.1.p 33 KYRFPSDSERQNNKQRERRRRAVTRKIFAGLRKHGNYKLPKHADTNDLLKALCEEAGWHVEEDGTIYR 100 6689999************************************************************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	3.0E-35	34	100	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 104 aa Download sequence Send to blast
MADEKTRAMK GCIKSGRGPW IVHRSTKDGV VTKYRFPSDS ERQNNKQRER RRRAVTRKIF 60 AGLRKHGNYK LPKHADTNDL LKALCEEAGW HVEEDGTIYR FKV*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	1e-15	54	100	391	437	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	1e-15	54	100	391	437	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	1e-15	54	100	391	437	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	1e-15	54	100	391	437	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Manes.08G096400.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017976358.1	1e-54	PREDICTED: protein BZR1 homolog 3
TrEMBL	A0A2C9VEV9	2e-71	A0A2C9VEV9_MANES; Uncharacterized protein
STRING	cassava4.1_031582m	2e-71	(Manihot esculenta)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF15152	11	13

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36780.1	7e-20	BES1/BZR1 homolog 2

Link Out ? help Back to Top
Phytozome	Manes.08G096400.1.p