PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.09G004500.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bZIP
Protein Properties Length: 468aa    MW: 51589.6 Da    PI: 8.4531
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.09G004500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.63.5e-10182222545
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                          k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Manes.09G004500.1.p 182 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 222
                          788*************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.1E-7171225No hitNo description
SMARTSM003382.1E-9178241IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415180224IPR004827Basic-leucine zipper domain
CDDcd147088.00E-22182234No hitNo description
SuperFamilySSF579597.5E-7182225No hitNo description
PfamPF001702.8E-7182222IPR004827Basic-leucine zipper domain
PROSITE patternPS000360185200IPR004827Basic-leucine zipper domain
PfamPF141444.3E-32264339IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 468 aa     Download sequence    Send to blast
MGTRTADVTG QNDNNALTEM PSFVPSIPNS NPMGTEGNSI RSRISSFGTL EQSLGFRIED  60
AVDLSRNPVF NQLKSSSQAI GTDVQFGTLN KSPAPSDVNL SSAVVRTQTL PLQKESQSNP  120
VTMLGSHREN WGETNVGDGS PRTDTSTDDT NDKNQRFERG QSTAVMASDS SDKSKEKTGD  180
QKTLRRLAQN REAARKSRLR KKAYVQQLES SRLKLTQLEQ ELQRARQQGI FISSSGDQSH  240
SMSGNGALAF DVEYARWLEE HNRQINELRA AVNSHAGDTE LRTIVDNVIA HFNDIFRLKG  300
VAAKADVFHI LSGMWKTPAE RCFMWIGGFR SSELLKLLVN QLEPLTEQQL MGIYNLQQSS  360
QQAEDALSQG MEALQQSLAE TLANGTPGSS GSSGNVANYM GQMAMAMGKL GTLEGFLRQA  420
DNLRQQTLEQ MHRVLTTRQS ARALLAINDY FSRLRALSSL WLARPRE*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.09G004500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021622913.10.0transcription factor TGA2.3-like
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A2C9V6G70.0A0A2C9V6G7_MANES; Uncharacterized protein
STRINGcassava4.1_008329m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14703494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-143bZIP family protein