PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.09G033500.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family G2-like
Protein Properties Length: 419aa    MW: 47164.7 Da    PI: 8.2903
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.09G033500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.42.4e-31242296155
              G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          k+r+rWt++LHe+Fv +v++LGG+ekAtPk+il+lm+ +gLt+ hvkSHLQkYR+
  Manes.09G033500.1.p 242 KTRIRWTQDLHEKFVMCVNRLGGAEKATPKAILKLMDTDGLTIFHVKSHLQKYRI 296
                          68****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512949.636239299IPR017930Myb domain
SuperFamilySSF466891.04E-16240296IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.7E-28240297IPR009057Homeodomain-like
TIGRFAMsTIGR015576.6E-23242297IPR006447Myb domain, plants
PfamPF002491.2E-7246295IPR001005SANT/Myb domain
PfamPF143791.2E-20328374IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    Send to blast
MNTSKIDCQE RVQQNNGLNG DFALHFSQCF GNQQSWNMGI RTQQPVMEAG LQQQNHRPND  60
KSSTTIMRSF ESPASAFYAT ERYMGFPQYD CQVGVPPLSF PYSKPFDSQQ SSRENYAIDP  120
GEQAESNLDL RRNLQPIVKP HFSVDHYHKS YKGPCSNSFG NKLHLFERNK LSNNGAASMG  180
HHFSIPFQAD QDHRVGGNPC ASPFSQLGFS SRQEIPSPRF SSPGACISSG NPEAAGAVLS  240
SKTRIRWTQD LHEKFVMCVN RLGGAEKATP KAILKLMDTD GLTIFHVKSH LQKYRIAKYM  300
PDSSEGKSEK RTTINDVPQI DTKTSGLQIS EALQLQLDVQ RRLHEQLEIQ KNLQLRIEEQ  360
GRKLQRMFDQ QQRTSNSLLR NQNLDRKSSP DDPAFSFEDI EVSIIEGSSD TQFPSKIS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-22242299259Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-22242299259Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A2e-22242299158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-22242299158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-22242299158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-22242299158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-22242299259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-22242299259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-22242299259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-22242299259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-22242299259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-22242299259Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.09G033500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021622513.10.0myb family transcription factor PHL5-like
RefseqXP_021622514.10.0myb family transcription factor PHL5-like
TrEMBLA0A2C9V9680.0A0A2C9V968_MANES; Uncharacterized protein
STRINGcassava4.1_008485m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37403465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.14e-80G2-like family protein