PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.09G123700.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family WRKY
Protein Properties Length: 317aa    MW: 35704.7 Da    PI: 6.8183
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.09G123700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY79.44e-25133193259
                          --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                          dDg++WrKYGqK++ +++fpr+Y+rCt++   gC+++k+v+r +e+p +  +tY+g+H+++
  Manes.09G123700.1.p 133 DDGHAWRKYGQKVILNAKFPRNYFRCTHKfdqGCQATKQVQRIEEEPPMYRTTYSGHHTCK 193
                          8***************************9999***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.9E-26121193IPR003657WRKY domain
PROSITE profilePS5081121.299127190IPR003657WRKY domain
SuperFamilySSF1182909.02E-25128193IPR003657WRKY domain
SMARTSM007748.2E-38132194IPR003657WRKY domain
PfamPF031064.1E-25133193IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MKSCCPENLP YNQRKAIDEL IRDKLIRGRE FANQLKVIFS DSIGDGSARA EDLVVKVVNT  60
FTSTLSILNG VESDEVSQFP ASIHVGSPCY DGRKSEDSGE SIRSTSKMRD RRECYKRRKA  120
SHSWIKDSPD LQDDGHAWRK YGQKVILNAK FPRNYFRCTH KFDQGCQATK QVQRIEEEPP  180
MYRTTYSGHH TCKNLLRASQ LMLDVPGVTD SSILLSFNDN GHGHHHDNIT NICDSPFLSS  240
FQSIKHHISH NESYSSHHYL VSPDDHLSKL DLEDVICGVH SSCTNNSSIT HQSSGVDMIV  300
TSVDSHLDEV LAYFDS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A9e-23133193969OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.09G123700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021622706.10.0probable WRKY transcription factor 70
TrEMBLA0A2C9VBF60.0A0A2C9VBF6_MANES; Uncharacterized protein
STRINGcassava4.1_033846m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19953486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.13e-43WRKY DNA-binding protein 70