PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.09G125000.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family NAC
Protein Properties Length: 185aa    MW: 21981.9 Da    PI: 7.6275
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.09G125000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM73.84.2e-23171126107
                  NAM   6 rFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                            +P+++elv+++Lk  + g+++++ + i+e+diyk ePwdLp  + + ee+ewyfF++ +++      ++ +t+ gyWk+tg+++++ +
  Manes.09G125000.1.p  17 GSRPKEKELVDHFLKLMLLGHDHQV-RRIPELDIYKREPWDLPlFRSELEEEEWYFFHPCRSRW-----PRETTEVGYWKNTGRKRKIRD 100
                          568*******************999.77***************778888999*******98864.....4558999*************9 PP

                  NAM  95 kkgelvglkktLv 107
                            +e++g+k+t+ 
  Manes.09G125000.1.p 101 -AQEEIGTKRTFR 112
                          .8899*****986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.66E-2310112IPR003441NAC domain
PROSITE profilePS5100521.10912157IPR003441NAC domain
PfamPF023653.0E-1017112IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
MTSTTSPSES VQDVGAGSRP KEKELVDHFL KLMLLGHDHQ VRRIPELDIY KREPWDLPLF  60
RSELEEEEWY FFHPCRSRWP RETTEVGYWK NTGRKRKIRD AQEEIGTKRT FRAFVLRKLF  120
KKPMPVTGEE ELRRTLAACD LENQNPYQRT HNPVLNEGET NQLMTSETTD IGFSKEMRQE  180
KALWN
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.09G125000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021674949.12e-81NAC domain-containing protein 62-like, partial
TrEMBLA0A2C9VAA31e-135A0A2C9VAA3_MANES; Uncharacterized protein (Fragment)
STRINGcassava4.1_032712m1e-136(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2258533
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.23e-22NAC 014