PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.09G153300.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bZIP
Protein Properties Length: 454aa    MW: 48496.1 Da    PI: 5.9325
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.09G153300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.11.3e-15250306359
                          XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                          + kr rr+ +NRe+ArrsR+RK+a + eLe+ v +L  eN++L k+ +  ++++ + 
  Manes.09G153300.1.p 250 DAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENSSLLKRFSDVSQKYNEA 306
                          689******************************************999999888765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.7E-12247303No hitNo description
SMARTSM003384.9E-19248312IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.473250305IPR004827Basic-leucine zipper domain
PfamPF001702.0E-13251303IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.05E-11252302No hitNo description
PROSITE patternPS000360255270IPR004827Basic-leucine zipper domain
PfamPF124987.5E-42319443IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 454 aa     Download sequence    Send to blast
MDRVFSVGEI SDQFWSPPSQ TPPASAQPDD YSKMNRSASE WAFQRFLQEA SVVAVSASAS  60
ASASDSSPQS SSAPAGDKSD VIEIKDKDND SFSGANDKTT ASSSFSNGRC TPSFNEAAAP  120
GAPPNIPVDS EEYQAFLKSK LQLACAAAAA QSRTSFLRPQ DSPARADSGS QASNASQLGT  180
HATSKGAGGD LSRSQDMDAN GPVGISSLSS ARKKSGATLK PTTSGSSREQ SEDDENEEET  240
EITENMDPAD AKRVRRMLSN RESARRSRRR KQAHLTELET QVSQLRVENS SLLKRFSDVS  300
QKYNEAAVDN RVLKADVETL RAKVKMAEET VKRITGLNPM FHAMPEISTT SMPSFDRSPS  360
EPSTDAAVAV QDDPKHQLCQ PQNHAVSAHD LGVNSALADI SSVENVRPHS EAAGLTGNKL  420
GRTASLQRVA SLEHLQKRIR GGVTPSEPQS NRE*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1264271RRSRRRKQ
2266271SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.09G153300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021621944.10.0light-inducible protein CPRF2-like
SwissprotQ990901e-126CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLA0A2C9VB310.0A0A2C9VB31_MANES; Uncharacterized protein
STRINGcassava4.1_007456m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41763358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.25e-71bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]