PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.10G033900.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bHLH
Protein Properties Length: 167aa    MW: 19136.7 Da    PI: 8.9366
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.10G033900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.76.6e-06661051155
                          HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          rR +++ +++  L++l+ +      +K + a++L++A  YIk Lq
  Manes.10G033900.1.p  66 RRSQKLADKITALQKLVSPY-----GKTDTASVLQEASLYIKLLQ 105
                          7999**************99.....9****************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.52155104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.53E-966115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-766114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
DFQSTTRRKR STEVVTSDLT DLIENRAAFS EWKKDKRRKA SSSEEQWLDH QVKQSTNIKD  60
HKVPVRRSQK LADKITALQK LVSPYGKTDT ASVLQEASLY IKLLQEQIKN LLQMLSSSCH  120
FQETDGRLLD LQSRGLCLFP ISVMQEFSQE NCFDTCNAYS IKSIFN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.10G033900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015580400.11e-71uncharacterized protein LOC8265985 isoform X1
RefseqXP_015580401.11e-71uncharacterized protein LOC8265985 isoform X1
RefseqXP_015580402.11e-71transcription factor bHLH133 isoform X2
SwissprotQ7XJU18e-19BH154_ARATH; Transcription factor bHLH154
TrEMBLA0A2C9V2Y31e-119A0A2C9V2Y3_MANES; Uncharacterized protein (Fragment)
STRINGcassava4.1_033583m2e-99(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF133551522
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31730.13e-21bHLH family protein