PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.10G036200.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family C2H2
Protein Properties Length: 200aa    MW: 21606.4 Da    PI: 8.6003
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.10G036200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.60.00185072123
                         EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                         ++C+ C++ F++   L  H  +H
  Manes.10G036200.1.p 50 FECKTCNRQFPSFQALGGHRASH 72
                         89**********99999998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.2E-84872No hitNo description
PfamPF139123.4E-134974IPR007087Zinc finger, C2H2
SMARTSM003550.165072IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.8275077IPR007087Zinc finger, C2H2
PROSITE patternPS0002805272IPR007087Zinc finger, C2H2
SuperFamilySSF576671.2E-8100127No hitNo description
PfamPF139125.6E-10104129IPR007087Zinc finger, C2H2
PROSITE profilePS501579.536105132IPR007087Zinc finger, C2H2
SMARTSM003550.58105127IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280107127IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
MKRSFYEAEL ENSITMANCL MLLSHGRETQ FPSFEALKNS GVINSPSRVF ECKTCNRQFP  60
SFQALGGHRA SHKKPRLTGG GGDGSSETQS SSSSSSSAVA KPKTHECSVC GLEFAIGQAL  120
GGHMRRHRGA LNDQSMQLQQ GDGNTTSRSA QVVMPPIVKK SNSRRVLCLD LNLTPCENDL  180
ELFSHGKAPP NPMVIDCFF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.10G036200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021626334.11e-147zinc finger protein ZAT11-like
TrEMBLA0A2C9V3021e-145A0A2C9V302_MANES; Uncharacterized protein
STRINGcassava4.1_034304m1e-146(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF31634175
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.14e-35C2H2 family protein