PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.13G109400.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bZIP
Protein Properties Length: 190aa    MW: 22100.8 Da    PI: 9.8354
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.13G109400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.62.1e-1188147463
                          XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                          +++ rr+++NRe+ArrsR RK+  +e+L+  v +L+ eN++L ++l     ++ +++ e+
  Manes.13G109400.1.p  88 DRKRRRMISNRESARRSRMRKQRHLENLRYQVNKLKIENRELTNRLRLVLYHCNTVRREN 147
                          7899***************************************99988877777776665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.9E-1181137No hitNo description
SMARTSM003382.7E-1385149IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.79587150IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.61E-1089137No hitNo description
PfamPF001701.3E-889147IPR004827Basic-leucine zipper domain
CDDcd147021.54E-1890141No hitNo description
PROSITE patternPS00036092107IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
MMSAIPATLF PSADSVLGNQ FPSFENSFTP PWDCSDLFTF PDYQSPKAVV SSSGSDDPNE  60
PNKSNQNHAN SNCSSDDPNP ITVSMIDDRK RRRMISNRES ARRSRMRKQR HLENLRYQVN  120
KLKIENRELT NRLRLVLYHC NTVRRENEQL RYEHSMLRQK LSNIRQFLML KQLQQFTSAW  180
PCNNTTTTE*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18892RKRRR
2101108RRSRMRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.13G109400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021632302.11e-139basic leucine zipper 4-like
TrEMBLA0A2C9UQZ01e-138A0A2C9UQZ0_MANES; Uncharacterized protein
STRINGcassava4.1_017015m1e-138(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54353254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.15e-39basic leucine-zipper 5