PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.14G031500.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bHLH
Protein Properties Length: 252aa    MW: 28743.8 Da    PI: 8.8746
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.14G031500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.74.8e-0973125155
                          CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                          ++ +h   ErrRR+++ + +  Lr llP       ++K   ++   +A +YIk+Lq
  Manes.14G031500.1.p  73 KKIMHRDFERRRRQDMTTLYTSLRNLLPLeY---IKGKRAISDQIHQAEKYIKDLQ 125
                          577899***********************77...9********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.57E-1172141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.70672124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.91E-573129No hitNo description
Gene3DG3DSA:4.10.280.102.1E-774141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.7E-674125IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
MFPSHQNNEL SFQISSTPYQ ETSVPQDMIL ILQGHTTADG IDPCNENKKR KDQQRIPCFS  60
RKKDEKSAEI STKKIMHRDF ERRRRQDMTT LYTSLRNLLP LEYIKGKRAI SDQIHQAEKY  120
IKDLQKKIKQ LSLYRDEMKN SSNLRALGHE AEGERINSFA PTSVVVRSSF LGVEIVISSG  180
GLGKQVFHLS RVLELLREEG LDVVCFTSAK VNQRVIHTIQ SEVSYMTCID ISELQNKLIE  240
AMPSTSTENP N*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.14G031500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021634510.10.0transcription factor bHLH120-like
TrEMBLA0A2C9UJB20.0A0A2C9UJB2_MANES; Uncharacterized protein
STRINGcassava4.1_022669m1e-116(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF79233125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.13e-49bHLH family protein