PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.14G031600.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bHLH
Protein Properties Length: 238aa    MW: 26874.5 Da    PI: 9.4867
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.14G031600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.35.5e-1369120255
                          HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                          +  h  +Er+RR+++ + ++ Lr+llP       ++K s ++   +Av+YIk+L+
  Manes.14G031600.1.p  69 KLLHRDIERQRRQEMTTLYASLRSLLPLeY---IKGKRSISDHMNEAVNYIKHLK 120
                          6679************************77...********************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.96E-1466140IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.35E-1067124No hitNo description
PROSITE profilePS5088814.18367119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.1E-1069119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-1069138IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.8E-573125IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MFPLQQGNEL CFQISSNTRN EIPQDLITSH PALYGSTDVA DDLGQSRRRK SISMDNDQSA  60
RDNSNDKKKL LHRDIERQRR QEMTTLYASL RSLLPLEYIK GKRSISDHMN EAVNYIKHLK  120
KRIKELDSKR DELKKKTNFR NIPIQSSGNS NNCSLSTGFI IRPCLSGIQI VFSSGFGEQS  180
SSLSRALQLL LEAEISVVNC VSTKVNERVF HTIHAEVKDS TCVNLSELQQ KLNPLVP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14550SRRRKS
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.14G031600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021593215.11e-175transcription factor bHLH36-like
TrEMBLA0A2C9UJC81e-173A0A2C9UJC8_MANES; Uncharacterized protein
STRINGcassava4.1_030073m1e-174(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF79233125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.11e-39bHLH family protein