PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.14G046300.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bHLH
Protein Properties Length: 347aa    MW: 38632.5 Da    PI: 6.7185
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.14G046300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.92e-09176223455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Manes.14G046300.1.p 176 SHSLAERVRREKISERMKILQRLVPGC----DKVTGKALMLDEIINYVQSLQ 223
                          8*************************9....555*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.81E-10170227No hitNo description
SuperFamilySSF474596.67E-17170238IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.3E-16172237IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.739172222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-6176223IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.4E-10178228IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009739Biological Processresponse to gibberellin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MAAFSYQHYP FHLDSVFLPS TSFKNLSGFM EEGSINTNCF SQFYPPELPL QTPLDVSFHD  60
TSRLDHSSML ALSDNETSVT KKQSTDSSTV VDKLESGEQV TQKLPPMDKK RKRANESSLN  120
SAQSKDARDA RSKKQKKCNS ELKEEEKRPK AEKKVPEEPP TGYIHVRARR GQATDSHSLA  180
ERVRREKISE RMKILQRLVP GCDKVTGKAL MLDEIINYVQ SLQNQVEFLS MKLASVNPLF  240
YDFGMDLDAM IVRPEGLSSL ASSLPPMQQC TPTQPTGIAD AATANTPTPT PTFAYPLFDS  300
SAGSLLTQGQ GEFIHQDNGS LLWDVDEQRQ KFLNPSGFSN NLCSFH*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1110135RKRANESSLNSAQSKDARDARSKKQK
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.14G046300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFQ3918265e-76FQ391826.1 Vitis vinifera clone SS0AFA9YF22.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021634687.10.0transcription factor bHLH137-like
TrEMBLA0A2C9UIY90.0A0A2C9UIY9_MANES; Uncharacterized protein
STRINGcassava4.1_023959m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41823358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.24e-60bHLH family protein