PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.14G071900.1.p
Common NameKIN2
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family MYB_related
Protein Properties Length: 322aa    MW: 34486.6 Da    PI: 8.2715
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.14G071900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.73e-14107151347
                          SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          +WT+eE++l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
  Manes.14G071900.1.p 107 PWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 151
                          8*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129417.486100156IPR017930Myb domain
SuperFamilySSF466895.23E-17102157IPR009057Homeodomain-like
TIGRFAMsTIGR015575.8E-17103154IPR006447Myb domain, plants
SMARTSM007171.8E-10104154IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.2E-11106151IPR009057Homeodomain-like
PfamPF002491.9E-11107151IPR001005SANT/Myb domain
CDDcd001671.99E-9107152No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MAGTCTTGGG AAGGGAGEIM LFGVRVVVDS MRKSVSLNNL SQYEQPQELN KSNSNKDGSN  60
NNNNNSSSSK EDVAAAAAAA AAAGYASADD AVPHSSSSRG ERKRGVPWTE EEHKLFLLGL  120
QKVGKGDWRG ISRNFVKTRT PTQVASHAQK YFLRRSNLNR RRRRSSLFDI TTDTFSAFPM  180
EEDQAHCQDN KNKAPELHPL PPPLPEINNI SNFHMMPAFP MAVNPVVLPV PIESPVENLS  240
WGHGNPATNP SVDIIRPIPV LLTPHASGTS DFNLNLESSL DLPPLSLKLS LPSGQKESSP  300
KHSALQVMSS FNNGDSIISV A*
Functional Description ? help Back to Top
Source Description
UniProtBinds selectively to the DNA sequence 5'-[GA]GATAA-3' and may act as a transcription factor involved in the regulation of drought-responsive genes. Enhances stomatal closure in response to abscisic acid (ABA). Confers drought and salt tolerance. {ECO:0000269|PubMed:21030505}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.14G071900.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by drought, high salinity, and ABA. {ECO:0000269|PubMed:21030505}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJQ8078050.0JQ807805.1 Manihot esculenta KIN2 (KIN2) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021592697.10.0transcription factor MYB1R1-like
SwissprotQ2V9B08e-78MY1R1_SOLTU; Transcription factor MYB1R1
TrEMBLV9M5A00.0V9M5A0_MANES; KIN2
STRINGcassava4.1_011931m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF42483154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.24e-48MYB_related family protein
Publications ? help Back to Top
  1. Shin D, et al.
    Expression of StMYB1R-1, a novel potato single MYB-like domain transcription factor, increases drought tolerance.
    Plant Physiol., 2011. 155(1): p. 421-32
    [PMID:21030505]