PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Manes.14G078300.1.p

Organism

Manihot esculenta

Taxonomic ID

3983

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot

Family

Nin-like

Protein Properties

Length: 264aa MW: 30500.8 Da PI: 5.9005

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Manes.14G078300.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	83.5	2.1e-26	101	150	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 k +s +++s+yF++pi++AAkeL+v+lT+LK++CR++GI+RWPhRk+ sl Manes.14G078300.1.p 101 KALSRQTISMYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSL 150 7899*******************************************997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.905	82	170	IPR003035	RWP-RK domain
Pfam	PF02042	5.6E-21	103	150	IPR003035	RWP-RK domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0051302	Biological Process	regulation of cell division

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence Send to blast
MANWQNELAT QESFLAAYPL IESFVPDPFC ASLEIENSTI HGDQDVNGLG DWNEFSTLFD 60 PQKQLLLSCD SARGSSRTEP FEEEKKAKKC REEKVNNSIS KALSRQTISM YFYMPITQAA 120 KELNVGLTLL KKRCRELGIR RWPHRKLMSL QTLIKNVQEM KKVEGEESEK KLREAIEILE 180 RERKMVEETP DMQLENKTKR LRQACFKANY KKRRLMGMID KPSSSSSSTI TNKMMNEDEE 240 NIEEYEEIIS LLADPTSHTN MLF*

Functional Description ? help Back to Top
Source	Description
UniProt	Putative transcription factor. {ECO:0000250}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Manes.14G078300.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021592220.1	1e-175	protein RKD1-like
Swissprot	Q9M9U9	5e-61	RKD1_ARATH; Protein RKD1
TrEMBL	A0A2C9UJU2	0.0	A0A2C9UJU2_MANES; Uncharacterized protein
STRING	cassava4.1_033219m	0.0	(Manihot esculenta)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF6184	30	52

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18790.1	9e-55	RWP-RK domain-containing protein

Link Out ? help Back to Top
Phytozome	Manes.14G078300.1.p