PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Manes.14G098400.1.p

Organism

Manihot esculenta

Taxonomic ID

3983

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot

Family

G2-like

Protein Properties

Length: 384aa MW: 42199.8 Da PI: 9.2709

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Manes.14G098400.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.9	8.2e-32	213	268	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++ ++qLGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ Manes.14G098400.1.p 213 KQRRCWSPELHRRFLHSLQQLGGPHVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 268 79****************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	13.844	210	270	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	7.2E-28	210	271	IPR009057	Homeodomain-like
SuperFamily	SSF46689	2.2E-17	211	271	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.2E-26	213	268	IPR006447	Myb domain, plants
Pfam	PF00249	4.4E-6	215	266	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence Send to blast
MDYAEKMQRC HEYVEALEVE RSKILVFKRE LPLCLELITK AIEACRRELS GTTTDYLHGQ 60 SESSEQTSSE GTKPVLEEFI PIKKTNSSSD NDNEEQYLHK RNKNSSTNKD KNSSDHKKKS 120 DWLRSAQLWN QSPDPTPKED VSRKAVETEV NRNGGAFQPF QKEKTTGKNV QTTAKNPSSV 180 PASATSSTTE TGAGGTGGGS TRKEEKDGQS ERKQRRCWSP ELHRRFLHSL QQLGGPHVAT 240 PKQIRELMKV DGLTNDEVKS HLQKYRLHTR RPSPPIHNNS NPQAPQFVVV GGIWVQPPEY 300 AAVAATTASG ETSTIAAAAA ANGIYTPVAA PLSTAPPKLQ KQLLKHSEQM QLEERGSHSD 360 GGFRSNSPAT SSSTHTTTNS PSF*

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence Send to blast

MDYAEKMQRC HEYVEALEVE RSKILVFKRE LPLCLELITK AIEACRRELS GTTTDYLHGQ  60
SESSEQTSSE GTKPVLEEFI PIKKTNSSSD NDNEEQYLHK RNKNSSTNKD KNSSDHKKKS  120
DWLRSAQLWN QSPDPTPKED VSRKAVETEV NRNGGAFQPF QKEKTTGKNV QTTAKNPSSV  180
PASATSSTTE TGAGGTGGGS TRKEEKDGQS ERKQRRCWSP ELHRRFLHSL QQLGGPHVAT  240
PKQIRELMKV DGLTNDEVKS HLQKYRLHTR RPSPPIHNNS NPQAPQFVVV GGIWVQPPEY  300
AAVAATTASG ETSTIAAAAA ANGIYTPVAA PLSTAPPKLQ KQLLKHSEQM QLEERGSHSD  360
GGFRSNSPAT SSSTHTTTNS PSF*

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor involved in phosphate signaling in roots. {ECO:0000250\|UniProtKB:Q9FX67}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Manes.14G098400.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021634378.1	0.0	transcription factor HHO3
Swissprot	Q9FPE8	1e-113	HHO3_ARATH; Transcription factor HHO3
TrEMBL	A0A2C9UKC9	0.0	A0A2C9UKC9_MANES; Uncharacterized protein
STRING	cassava4.1_030590m	0.0	(Manihot esculenta)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF3918	33	63

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	1e-92	G2-like family protein

Link Out ? help Back to Top
Phytozome	Manes.14G098400.1.p

Publications ? help Back to Top
Nagarajan VK,Satheesh V,Poling MD,Raghothama KG,Jain A Arabidopsis MYB-Related HHO2 Exerts a Regulatory Influence on a Subset of Root Traits and Genes Governing Phosphate Homeostasis. Plant Cell Physiol., 2016. 57(6): p. 1142-52 [PMID:27016098]