PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.14G145100.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family Trihelix
Protein Properties Length: 261aa    MW: 29765.3 Da    PI: 10.6611
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.14G145100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix40.57e-132801086
             trihelix 10 LiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
                         Li+a  e+  +lrrg+lk+++W+ev++ +    + ++  ++ +qCk++++ ++k+yk +k+    +  +  s++p+f++l+
  Manes.14G145100.1.p  2 LIDAWGERYLELRRGNLKQKHWKEVADIVssreEYKKAAKTNIQCKNRIDTVKKKYKLEKAKIAAG--GGPSKWPFFERLD 80
                         8999999999*******************85444455566888******************99997..67779******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.5E-21282No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    Send to blast
MLIDAWGERY LELRRGNLKQ KHWKEVADIV SSREEYKKAA KTNIQCKNRI DTVKKKYKLE  60
KAKIAAGGGP SKWPFFERLD KLIGPTTKIL VTAAVAAAPL TSKVAMGIPV GIHNGGANSE  120
DSLPPEKKLR GVVQRGVNTK EVKERKGWRN LIRMLAQVIL KFEEVYEQAK NMKLQQVVLM  180
EKIRMKFARE LELQMMQFFI KTQIETSQLK CTRREEMIVI KIITSVVTHF TDVLKEFNFF  240
SLSATYHVLG MIKSLGKILS *
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.14G145100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021609286.11e-109trihelix transcription factor ASIL2-like
SwissprotQ9LJG81e-45ASIL2_ARATH; Trihelix transcription factor ASIL2
TrEMBLA0A2C9UMQ70.0A0A2C9UMQ7_MANES; Uncharacterized protein
STRINGcassava4.1_024387m1e-141(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF79193044
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14180.12e-33sequence-specific DNA binding transcription factors