PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.15G108400.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family ERF
Protein Properties Length: 295aa    MW: 32691.7 Da    PI: 8.7537
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.15G108400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.82.7e-183888155
                  AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         s++ GVr++  +g+WvAeI+d +   ++ r +lg+f+taeeAa+a+++a+  l+g
  Manes.15G108400.1.p 38 SKFVGVRQRA-SGKWVAEIKDTT---QKIRMWLGTFDTAEEAARAYDEAACLLRG 88
                         79*****999.7*********32...35**********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.24E-193897IPR016177DNA-binding domain
CDDcd000181.95E-323895No hitNo description
PfamPF008471.1E-123888IPR001471AP2/ERF domain
PROSITE profilePS5103219.3093996IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.4E-283996IPR001471AP2/ERF domain
SMARTSM003806.7E-3739102IPR001471AP2/ERF domain
PRINTSPR003671.6E-74051IPR001471AP2/ERF domain
PRINTSPR003671.6E-76278IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MLTRNRDMEY QSKKKPRAVS PDKKSKFKER STTNNGKSKF VGVRQRASGK WVAEIKDTTQ  60
KIRMWLGTFD TAEEAARAYD EAACLLRGSN TRTNFTTHVP TNSPISIKLR NLLNHKKILK  120
QNCPANTTSK TNIEASTMVS TRSSINSSCE NFLFSNCSNS FQSGNNNLDS LCTGVKQENY  180
QMSDDVYRPG LSGGAGGLGL ADSSQFYYSS WPFSTGFDQL PLMQEGMNLP KKFGLLPAVN  240
ELELAEFEGM KVEREVSAAA YAMTGVNDYL VNTNYDPSDT LWDVPTLSHL FCPS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.15G108400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021594637.10.0ethylene-responsive transcription factor RAP2-11-like
TrEMBLA0A2C9UFX60.0A0A2C9UFX6_MANES; Uncharacterized protein
STRINGcassava4.1_021815m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33413069
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.14e-50related to AP2 11