PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.15G110400.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family WRKY
Protein Properties Length: 125aa    MW: 14014.2 Da    PI: 6.2615
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.15G110400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY73.33.1e-233693259
                         --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
                         +Dgy+WrKYGqK +k+    rsY++C  ++C++kk+ e s++ p+ v i+Y g H h+
  Manes.15G110400.1.p 36 EDGYEWRKYGQKFIKNISKFRSYFKCRKQNCNAKKRAEWSEDKPDNVRIVYDGVHSHS 93
                         7********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.0E-242194IPR003657WRKY domain
PROSITE profilePS5081119.2333095IPR003657WRKY domain
SuperFamilySSF1182901.83E-223294IPR003657WRKY domain
SMARTSM007747.3E-253594IPR003657WRKY domain
PfamPF031061.3E-203692IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    Send to blast
MSEVSPAATE ASMETEEENR EEQAVEGESH RLVLPEDGYE WRKYGQKFIK NISKFRSYFK  60
CRKQNCNAKK RAEWSEDKPD NVRIVYDGVH SHSSSSSSSS SSSSSANQYN LLTQVSGNQP  120
PTSQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.15G110400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021596010.11e-87probable WRKY transcription factor 50 isoform X1
TrEMBLA0A2C9UF443e-86A0A2C9UF44_MANES; Uncharacterized protein
STRINGcassava4.1_026266m4e-87(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1895055
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29860.17e-14WRKY DNA-binding protein 71