 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Manes.15G130800.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
|
| Family |
GRAS |
| Protein Properties |
Length: 635aa MW: 69665.5 Da PI: 5.7368 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Manes.15G130800.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 454.5 | 6.5e-139 | 265 | 624 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPi 90
lv+lL++cAeav++++ la+al++++ la +++ +m+++a+yf+eALa+r++r ly p++ +++ s+ l++ f+e++P+
Manes.15G130800.1.p 265 LVHLLMACAEAVQQNNIPLAEALVKQIGYLAVSQAGAMRKVATYFAEALARRIYR----LY----PQSPIDHSLSDILQM--HFYETCPY 344
68*****************************************************....44....444444446666555..5******* PP
GRAS 91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnv 180
lkf+h+taNqaIlea+eg++rvH+iDf+++qG+QWpaLlqaLa Rp+gpp +R+Tg+g+p++++++ l+e+g++La++Ae+++v+fe++
Manes.15G130800.1.p 345 LKFAHFTANQAILEAFEGKKRVHVIDFSMNQGMQWPALLQALALRPGGPPAFRLTGIGPPSHDNSDHLQEVGWKLAQLAETIHVEFEYRG 434
****************************************************************************************** PP
GRAS 181 lvakrledleleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalf 268
+va++l+dl+ ++L+++p E++aVn+v++lh+ll++++++e+ vL +vk+++P+++++veqea+hn + Fl+rf+e+l+yys+lf
Manes.15G130800.1.p 435 FVANSLADLDASMLELRPseFESVAVNSVFELHKLLARPGAIEK----VLTVVKQMKPEIITIVEQEANHNCPVFLDRFTESLHYYSTLF 520
******************8789**********************....****************************************** PP
GRAS 269 dsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgs 357
dsle ++ s++++++++++lg++i+nvvaceg +r+erhetl +Wr rl+++GF pv+l+++a kqa++ll+ ++ +dgyrvee++g+
Manes.15G130800.1.p 521 DSLEGSV---SSQDKVMSEVYLGKQICNVVACEGVDRIERHETLTQWRTRLGSSGFVPVHLGSNAFKQASMLLALFAgGDGYRVEENNGC 607
******7...9999**************************************************************************** PP
GRAS 358 lvlgWkdrpLvsvSaWr 374
l+lgW++rpL+++SaWr
Manes.15G130800.1.p 608 LMLGWHTRPLIATSAWR 624
****************8 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0009737 | Biological Process | response to abscisic acid |
| GO:0009867 | Biological Process | jasmonic acid mediated signaling pathway |
| GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway |
| GO:0010187 | Biological Process | negative regulation of seed germination |
| GO:0010218 | Biological Process | response to far red light |
| GO:0042176 | Biological Process | regulation of protein catabolic process |
| GO:0042538 | Biological Process | hyperosmotic salinity response |
| GO:2000033 | Biological Process | regulation of seed dormancy process |
| GO:2000377 | Biological Process | regulation of reactive oxygen species metabolic process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 635 aa
Download sequence Send
to blast |
MKREYSNLHP RLDPATAGSS SSGYSNMPLA NSNLNSDASC KAKMWADDAQ ADGGMDELLA 60
VLGYKVRSSD MAEVAQKLEQ LEEVMGQVHE DGFSHIASET VHYNPSDLST WLESMLSELN 120
PNPIFDPVVV PAQPTLDDSF FAPPESSTIT SIDFAEHTHQ QGRQKQQNTN KQSRGVVFEE 180
SSSSDYDLKA IPGKSVFAQS HQIDSSSSSS RDPKRLKPAT SDHLYPPAAA SPSSSTIGAA 240
GSFAVSTEST RPVVLVDSQE NGIRLVHLLM ACAEAVQQNN IPLAEALVKQ IGYLAVSQAG 300
AMRKVATYFA EALARRIYRL YPQSPIDHSL SDILQMHFYE TCPYLKFAHF TANQAILEAF 360
EGKKRVHVID FSMNQGMQWP ALLQALALRP GGPPAFRLTG IGPPSHDNSD HLQEVGWKLA 420
QLAETIHVEF EYRGFVANSL ADLDASMLEL RPSEFESVAV NSVFELHKLL ARPGAIEKVL 480
TVVKQMKPEI ITIVEQEANH NCPVFLDRFT ESLHYYSTLF DSLEGSVSSQ DKVMSEVYLG 540
KQICNVVACE GVDRIERHET LTQWRTRLGS SGFVPVHLGS NAFKQASMLL ALFAGGDGYR 600
VEENNGCLML GWHTRPLIAT SAWRLANKQA AVAH*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that represses transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | KT696440 | 0.0 | KT696440.1 Hevea brasiliensis DELLA protein GAIP-B (GAIP-B) mRNA, complete cds. |
